Protein–RNA interactions for Protein: P70340

Smad1, Mothers against decapentaplegic homolog 1, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad1P70340 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Smad1P70340 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.63□□□□□ -0.23
Smad1P70340 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.63□□□□□ -0.23
Smad1P70340 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smad1P70340 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smad1P70340 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smad1P70340 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.63□□□□□ -0.23
Smad1P70340 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.63□□□□□ -0.23
Smad1P70340 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Smad1P70340 Gm27892-201ENSMUST00000185017 106 ntBASIC13.63□□□□□ -0.23
Smad1P70340 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.63□□□□□ -0.23
Smad1P70340 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.63□□□□□ -0.23
Smad1P70340 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.63□□□□□ -0.23
Smad1P70340 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Smad1P70340 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.63□□□□□ -0.23
Smad1P70340 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Smad1P70340 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.63□□□□□ -0.23
Smad1P70340 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Smad1P70340 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.63□□□□□ -0.23
Smad1P70340 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Smad1P70340 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.62□□□□□ -0.23
Smad1P70340 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.62□□□□□ -0.23
Smad1P70340 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Smad1P70340 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.62□□□□□ -0.23
Smad1P70340 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.62□□□□□ -0.23
Smad1P70340 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Smad1P70340 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.62□□□□□ -0.23
Smad1P70340 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.62□□□□□ -0.23
Smad1P70340 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.62□□□□□ -0.23
Smad1P70340 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.62□□□□□ -0.23
Smad1P70340 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Smad1P70340 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.61□□□□□ -0.23
Smad1P70340 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.61□□□□□ -0.23
Smad1P70340 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Smad1P70340 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.61□□□□□ -0.23
Smad1P70340 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 Gm15678-201ENSMUST00000117573 960 ntBASIC13.61□□□□□ -0.23
Smad1P70340 Gm12341-201ENSMUST00000119724 503 ntBASIC13.61□□□□□ -0.23
Smad1P70340 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.61□□□□□ -0.23
Smad1P70340 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.61□□□□□ -0.23
Smad1P70340 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.61□□□□□ -0.23
Smad1P70340 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.61□□□□□ -0.23
Smad1P70340 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.61□□□□□ -0.23
Smad1P70340 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.61□□□□□ -0.23
Smad1P70340 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Smad1P70340 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Smad1P70340 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms