Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cux2P70298 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cux2P70298 Gm22133-201ENSMUST00000102082 109 ntBASIC21.15■□□□□ 0.98
Cux2P70298 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cux2P70298 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cux2P70298 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC21.15■□□□□ 0.98
Cux2P70298 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Cux2P70298 Mir7076-201ENSMUST00000183519 74 ntBASIC21.15■□□□□ 0.98
Cux2P70298 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC21.15■□□□□ 0.98
Cux2P70298 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cux2P70298 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC21.15■□□□□ 0.98
Cux2P70298 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cux2P70298 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC21.15■□□□□ 0.98
Cux2P70298 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cux2P70298 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cux2P70298 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cux2P70298 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cux2P70298 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cux2P70298 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cux2P70298 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cux2P70298 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cux2P70298 Gm23596-201ENSMUST00000104304 132 ntBASIC21.14■□□□□ 0.98
Cux2P70298 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cux2P70298 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cux2P70298 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC21.14■□□□□ 0.98
Cux2P70298 Gm10774-201ENSMUST00000188689 204 ntBASIC21.14■□□□□ 0.98
Cux2P70298 Gm3028-201ENSMUST00000213805 1119 ntBASIC21.14■□□□□ 0.98
Cux2P70298 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cux2P70298 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cux2P70298 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Cux2P70298 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cux2P70298 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC21.14■□□□□ 0.97
Cux2P70298 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
Cux2P70298 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cux2P70298 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Cux2P70298 Gm18626-201ENSMUST00000221512 1409 ntBASIC21.13■□□□□ 0.97
Cux2P70298 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cux2P70298 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cux2P70298 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Cux2P70298 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Cux2P70298 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC21.13■□□□□ 0.97
Cux2P70298 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cux2P70298 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC21.13■□□□□ 0.97
Cux2P70298 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC21.13■□□□□ 0.97
Cux2P70298 Gm28324-201ENSMUST00000187913 264 ntBASIC21.13■□□□□ 0.97
Cux2P70298 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC21.13■□□□□ 0.97
Cux2P70298 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC21.13■□□□□ 0.97
Cux2P70298 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC21.13■□□□□ 0.97
Cux2P70298 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Cux2P70298 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cux2P70298 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cux2P70298 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cux2P70298 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC21.13■□□□□ 0.97
Cux2P70298 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC21.13■□□□□ 0.97
Cux2P70298 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cux2P70298 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cux2P70298 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cux2P70298 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cux2P70298 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cux2P70298 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Cux2P70298 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cux2P70298 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cux2P70298 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cux2P70298 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cux2P70298 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
Cux2P70298 Gm11960-202ENSMUST00000181063 2858 ntBASIC21.13■□□□□ 0.97
Cux2P70298 Gm12816-201ENSMUST00000118069 1212 ntBASIC21.12■□□□□ 0.97
Cux2P70298 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Gm37028-201ENSMUST00000194276 107 ntBASIC21.12■□□□□ 0.97
Cux2P70298 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC21.12■□□□□ 0.97
Cux2P70298 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Gm5879-201ENSMUST00000089501 1209 ntBASIC21.12■□□□□ 0.97
Cux2P70298 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC21.12■□□□□ 0.97
Cux2P70298 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Cux2P70298 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC21.12■□□□□ 0.97
Cux2P70298 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC21.12■□□□□ 0.97
Cux2P70298 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cux2P70298 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms