Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Gm16202-201ENSMUST00000117532 544 ntBASIC12.47□□□□□ -0.41
Nup43P59235 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Nup43P59235 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.47□□□□□ -0.41
Nup43P59235 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nup43P59235 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.47□□□□□ -0.41
Nup43P59235 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.47□□□□□ -0.41
Nup43P59235 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.47□□□□□ -0.41
Nup43P59235 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.47□□□□□ -0.41
Nup43P59235 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Nup43P59235 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nup43P59235 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.46□□□□□ -0.41
Nup43P59235 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.46□□□□□ -0.41
Nup43P59235 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.46□□□□□ -0.41
Nup43P59235 Gm11814-201ENSMUST00000119515 929 ntBASIC12.46□□□□□ -0.41
Nup43P59235 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.46□□□□□ -0.41
Nup43P59235 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.46□□□□□ -0.41
Nup43P59235 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.46□□□□□ -0.41
Nup43P59235 Gm8652-201ENSMUST00000181363 964 ntBASIC12.46□□□□□ -0.41
Nup43P59235 Gm27839-201ENSMUST00000184242 106 ntBASIC12.46□□□□□ -0.41
Nup43P59235 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.46□□□□□ -0.41
Nup43P59235 Gm8598-201ENSMUST00000221184 836 ntBASIC12.46□□□□□ -0.41
Nup43P59235 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nup43P59235 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.46□□□□□ -0.42
Nup43P59235 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup43P59235 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup43P59235 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup43P59235 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup43P59235 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nup43P59235 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.46□□□□□ -0.42
Nup43P59235 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Nup43P59235 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nup43P59235 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.45□□□□□ -0.42
Nup43P59235 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Nup43P59235 Proscos-202ENSMUST00000178990 666 ntBASIC12.45□□□□□ -0.42
Nup43P59235 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Gm44069-201ENSMUST00000204898 506 ntBASIC12.45□□□□□ -0.42
Nup43P59235 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Nup43P59235 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Nup43P59235 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.45□□□□□ -0.42
Nup43P59235 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nup43P59235 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.45□□□□□ -0.42
Nup43P59235 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Nup43P59235 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms