Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lim2P56563 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lim2P56563 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Lim2P56563 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.21□□□□□ -0.3
Lim2P56563 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.21□□□□□ -0.3
Lim2P56563 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lim2P56563 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lim2P56563 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lim2P56563 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Lim2P56563 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.21□□□□□ -0.3
Lim2P56563 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.2□□□□□ -0.3
Lim2P56563 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.2□□□□□ -0.3
Lim2P56563 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.2□□□□□ -0.3
Lim2P56563 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.2□□□□□ -0.3
Lim2P56563 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.2□□□□□ -0.3
Lim2P56563 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.2□□□□□ -0.3
Lim2P56563 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.2□□□□□ -0.3
Lim2P56563 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.2□□□□□ -0.3
Lim2P56563 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lim2P56563 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lim2P56563 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Lim2P56563 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Mir7221-201ENSMUST00000184009 72 ntBASIC13.19□□□□□ -0.3
Lim2P56563 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.19□□□□□ -0.3
Lim2P56563 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.19□□□□□ -0.3
Lim2P56563 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.19□□□□□ -0.3
Lim2P56563 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.19□□□□□ -0.3
Lim2P56563 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.19□□□□□ -0.3
Lim2P56563 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Gm8598-201ENSMUST00000221184 836 ntBASIC13.19□□□□□ -0.3
Lim2P56563 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.19□□□□□ -0.3
Lim2P56563 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Gm10012-201ENSMUST00000078252 192 ntBASIC13.19□□□□□ -0.3
Lim2P56563 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.19□□□□□ -0.3
Lim2P56563 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Lim2P56563 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lim2P56563 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.19□□□□□ -0.3
Lim2P56563 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lim2P56563 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lim2P56563 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
Lim2P56563 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lim2P56563 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lim2P56563 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Lim2P56563 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lim2P56563 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms