Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Gm10275-201ENSMUST00000092620 635 ntBASIC12.68□□□□□ -0.38
Sox3P53784 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Sox3P53784 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sox3P53784 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sox3P53784 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.67□□□□□ -0.38
Sox3P53784 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sox3P53784 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.67□□□□□ -0.38
Sox3P53784 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Sox3P53784 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sox3P53784 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.67□□□□□ -0.38
Sox3P53784 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.67□□□□□ -0.38
Sox3P53784 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.67□□□□□ -0.38
Sox3P53784 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox3P53784 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.67□□□□□ -0.38
Sox3P53784 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC12.67□□□□□ -0.38
Sox3P53784 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.67□□□□□ -0.38
Sox3P53784 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.67□□□□□ -0.38
Sox3P53784 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC12.67□□□□□ -0.38
Sox3P53784 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Gm6983-201ENSMUST00000214912 628 ntBASIC12.67□□□□□ -0.38
Sox3P53784 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Sox3P53784 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Sox3P53784 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Sox3P53784 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Sox3P53784 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Sox3P53784 Gm13689-201ENSMUST00000119360 685 ntBASIC12.66□□□□□ -0.38
Sox3P53784 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.66□□□□□ -0.38
Sox3P53784 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Gm38341-201ENSMUST00000195357 515 ntBASIC12.66□□□□□ -0.38
Sox3P53784 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox3P53784 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.66□□□□□ -0.38
Sox3P53784 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.66□□□□□ -0.38
Sox3P53784 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Sox3P53784 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Mir433-201ENSMUST00000093564 124 ntBASIC12.66□□□□□ -0.38
Sox3P53784 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.66□□□□□ -0.38
Sox3P53784 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.66□□□□□ -0.38
Sox3P53784 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Sox3P53784 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Sox3P53784 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.66□□□□□ -0.38
Sox3P53784 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Sox3P53784 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms