Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Lbx1P52955 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.76□□□□□ -0.37
Lbx1P52955 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lbx1P52955 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Lbx1P52955 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Lbx1P52955 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lbx1P52955 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lbx1P52955 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lbx1P52955 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.76□□□□□ -0.37
Lbx1P52955 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Lbx1P52955 Gm44069-201ENSMUST00000204898 506 ntBASIC12.76□□□□□ -0.37
Lbx1P52955 Gm19091-201ENSMUST00000208120 978 ntBASIC12.76□□□□□ -0.37
Lbx1P52955 Gm8712-201ENSMUST00000221090 701 ntBASIC12.76□□□□□ -0.37
Lbx1P52955 Arhgef33-210ENSMUST00000225548 456 ntBASIC12.76□□□□□ -0.37
Lbx1P52955 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.76□□□□□ -0.37
Lbx1P52955 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Lbx1P52955 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.76□□□□□ -0.37
Lbx1P52955 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.76□□□□□ -0.37
Lbx1P52955 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Lbx1P52955 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC12.76□□□□□ -0.37
Lbx1P52955 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Lbx1P52955 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Lbx1P52955 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC12.75□□□□□ -0.37
Lbx1P52955 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Lbx1P52955 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.75□□□□□ -0.37
Lbx1P52955 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.75□□□□□ -0.37
Lbx1P52955 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.75□□□□□ -0.37
Lbx1P52955 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Lbx1P52955 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.75□□□□□ -0.37
Lbx1P52955 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.75□□□□□ -0.37
Lbx1P52955 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Lbx1P52955 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Lbx1P52955 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Gm9111-201ENSMUST00000219394 709 ntBASIC12.74□□□□□ -0.37
Lbx1P52955 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.74□□□□□ -0.37
Lbx1P52955 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lbx1P52955 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms