Protein–RNA interactions for Protein: P50228

Cxcl5, C-X-C motif chemokine 5, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl5P50228 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Gm22175-201ENSMUST00000175007 78 ntBASIC11.54□□□□□ -0.56
Cxcl5P50228 Gm25144-201ENSMUST00000179561 110 ntBASIC11.54□□□□□ -0.56
Cxcl5P50228 Gm25352-201ENSMUST00000179815 110 ntBASIC11.54□□□□□ -0.56
Cxcl5P50228 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Gm37714-201ENSMUST00000194742 342 ntBASIC11.54□□□□□ -0.56
Cxcl5P50228 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.54□□□□□ -0.56
Cxcl5P50228 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cxcl5P50228 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cxcl5P50228 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cxcl5P50228 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cxcl5P50228 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cxcl5P50228 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.54□□□□□ -0.56
Cxcl5P50228 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cxcl5P50228 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.53□□□□□ -0.56
Cxcl5P50228 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cxcl5P50228 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cxcl5P50228 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cxcl5P50228 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.53□□□□□ -0.56
Cxcl5P50228 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cxcl5P50228 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.53□□□□□ -0.56
Cxcl5P50228 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.53□□□□□ -0.56
Cxcl5P50228 Shd-206ENSMUST00000225145 998 ntBASIC11.53□□□□□ -0.56
Cxcl5P50228 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cxcl5P50228 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cxcl5P50228 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cxcl5P50228 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 AC154767.3-201ENSMUST00000225150 1342 ntBASIC11.53□□□□□ -0.56
Cxcl5P50228 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cxcl5P50228 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.53□□□□□ -0.56
Cxcl5P50228 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cxcl5P50228 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.53□□□□□ -0.56
Cxcl5P50228 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cxcl5P50228 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Cxcl5P50228 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl5P50228 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl5P50228 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl5P50228 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl5P50228 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl5P50228 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl5P50228 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl5P50228 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl5P50228 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl5P50228 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl5P50228 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl5P50228 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Cxcl5P50228 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cxcl5P50228 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl5P50228 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cxcl5P50228 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cxcl5P50228 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms