Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Prox1P48437 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prox1P48437 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Prox1P48437 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prox1P48437 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prox1P48437 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prox1P48437 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prox1P48437 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prox1P48437 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prox1P48437 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Prox1P48437 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Prox1P48437 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Prox1P48437 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Prox1P48437 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Prox1P48437 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Gm8410-201ENSMUST00000117225 605 ntBASIC12.68□□□□□ -0.38
Prox1P48437 Gm15460-201ENSMUST00000118147 391 ntBASIC12.68□□□□□ -0.38
Prox1P48437 Gm15653-201ENSMUST00000119247 907 ntBASIC12.68□□□□□ -0.38
Prox1P48437 Gm13616-201ENSMUST00000120600 222 ntBASIC12.68□□□□□ -0.38
Prox1P48437 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.68□□□□□ -0.38
Prox1P48437 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Gm21470-201ENSMUST00000187680 696 ntBASIC12.68□□□□□ -0.38
Prox1P48437 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Gm10253-201ENSMUST00000194270 940 ntBASIC12.68□□□□□ -0.38
Prox1P48437 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.68□□□□□ -0.38
Prox1P48437 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.68□□□□□ -0.38
Prox1P48437 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Prox1P48437 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Prox1P48437 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.68□□□□□ -0.38
Prox1P48437 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Prox1P48437 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.68□□□□□ -0.38
Prox1P48437 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Prox1P48437 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Prox1P48437 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.67□□□□□ -0.38
Prox1P48437 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.67□□□□□ -0.38
Prox1P48437 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Prox1P48437 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.67□□□□□ -0.38
Prox1P48437 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.67□□□□□ -0.38
Prox1P48437 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.67□□□□□ -0.38
Prox1P48437 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.67□□□□□ -0.38
Prox1P48437 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.67□□□□□ -0.38
Prox1P48437 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.67□□□□□ -0.38
Prox1P48437 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Prox1P48437 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.67□□□□□ -0.38
Prox1P48437 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Prox1P48437 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms