Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rph3aP47708 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Rph3aP47708 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.78□□□□□ -0.36
Rph3aP47708 Gm8515-201ENSMUST00000194852 576 ntBASIC12.78□□□□□ -0.36
Rph3aP47708 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Gm6983-201ENSMUST00000214912 628 ntBASIC12.78□□□□□ -0.36
Rph3aP47708 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rph3aP47708 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rph3aP47708 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Rph3aP47708 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Rph3aP47708 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Rph3aP47708 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Rph3aP47708 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Rph3aP47708 Gm10652-201ENSMUST00000199790 2622 ntBASIC12.77□□□□□ -0.36
Rph3aP47708 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rph3aP47708 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rph3aP47708 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rph3aP47708 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rph3aP47708 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rph3aP47708 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rph3aP47708 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rph3aP47708 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rph3aP47708 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rph3aP47708 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.77□□□□□ -0.36
Rph3aP47708 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rph3aP47708 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rph3aP47708 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Rph3aP47708 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Rph3aP47708 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.77□□□□□ -0.37
Rph3aP47708 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.77□□□□□ -0.37
Rph3aP47708 Gm14928-201ENSMUST00000120198 477 ntBASIC12.77□□□□□ -0.37
Rph3aP47708 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.77□□□□□ -0.37
Rph3aP47708 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.77□□□□□ -0.37
Rph3aP47708 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Rph3aP47708 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rph3aP47708 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.77□□□□□ -0.37
Rph3aP47708 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.77□□□□□ -0.37
Rph3aP47708 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.77□□□□□ -0.37
Rph3aP47708 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rph3aP47708 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rph3aP47708 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rph3aP47708 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rph3aP47708 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rph3aP47708 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rph3aP47708 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.77□□□□□ -0.37
Rph3aP47708 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Rph3aP47708 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rph3aP47708 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rph3aP47708 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.77□□□□□ -0.37
Rph3aP47708 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rph3aP47708 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rph3aP47708 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rph3aP47708 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rph3aP47708 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Rph3aP47708 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Rph3aP47708 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rph3aP47708 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Rph3aP47708 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rph3aP47708 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rph3aP47708 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rph3aP47708 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.76□□□□□ -0.37
Rph3aP47708 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rph3aP47708 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Rph3aP47708 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rph3aP47708 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rph3aP47708 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rph3aP47708 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.76□□□□□ -0.37
Rph3aP47708 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.76□□□□□ -0.37
Rph3aP47708 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.76□□□□□ -0.37
Rph3aP47708 Gm12091-201ENSMUST00000146791 830 ntBASIC12.76□□□□□ -0.37
Rph3aP47708 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.76□□□□□ -0.37
Rph3aP47708 Gm15429-201ENSMUST00000151268 798 ntBASIC12.76□□□□□ -0.37
Rph3aP47708 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.76□□□□□ -0.37
Rph3aP47708 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rph3aP47708 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Rph3aP47708 Gm27701-201ENSMUST00000184498 110 ntBASIC12.76□□□□□ -0.37
Rph3aP47708 Gm29608-201ENSMUST00000190444 463 ntBASIC12.76□□□□□ -0.37
Rph3aP47708 Gm44397-201ENSMUST00000195950 113 ntBASIC12.76□□□□□ -0.37
Rph3aP47708 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rph3aP47708 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.76□□□□□ -0.37
Rph3aP47708 Gm6180-201ENSMUST00000065243 498 ntBASIC12.76□□□□□ -0.37
Rph3aP47708 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Rph3aP47708 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms