Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm44251-201ENSMUST00000204963 442 ntBASIC12.74□□□□□ -0.37
Sox18P43680 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox18P43680 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.74□□□□□ -0.37
Sox18P43680 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox18P43680 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox18P43680 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox18P43680 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox18P43680 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox18P43680 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.74□□□□□ -0.37
Sox18P43680 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox18P43680 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox18P43680 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox18P43680 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.74□□□□□ -0.37
Sox18P43680 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.74□□□□□ -0.37
Sox18P43680 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Sox18P43680 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox18P43680 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.73□□□□□ -0.37
Sox18P43680 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox18P43680 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox18P43680 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Gm14659-201ENSMUST00000117667 843 ntBASIC12.73□□□□□ -0.37
Sox18P43680 Gm7857-201ENSMUST00000117957 358 ntBASIC12.73□□□□□ -0.37
Sox18P43680 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.73□□□□□ -0.37
Sox18P43680 Gm14277-201ENSMUST00000121195 360 ntBASIC12.73□□□□□ -0.37
Sox18P43680 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Sox18P43680 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Sox18P43680 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Gm43316-201ENSMUST00000197252 1295 ntBASIC12.73□□□□□ -0.37
Sox18P43680 Gm17330-201ENSMUST00000221047 165 ntBASIC12.73□□□□□ -0.37
Sox18P43680 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.73□□□□□ -0.37
Sox18P43680 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sox18P43680 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Sox18P43680 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Sox18P43680 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sox18P43680 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sox18P43680 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox18P43680 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Sox18P43680 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.72□□□□□ -0.37
Sox18P43680 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.72□□□□□ -0.37
Sox18P43680 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sox18P43680 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Gm14726-201ENSMUST00000120623 896 ntBASIC12.72□□□□□ -0.37
Sox18P43680 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Gm8584-201ENSMUST00000171982 758 ntBASIC12.72□□□□□ -0.37
Sox18P43680 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sox18P43680 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC12.72□□□□□ -0.37
Sox18P43680 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox18P43680 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.72□□□□□ -0.37
Sox18P43680 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC12.72□□□□□ -0.37
Sox18P43680 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Sox18P43680 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Sox18P43680 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox18P43680 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms