Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.1□□□□□ -0.47
Nkx2-2P42586 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Nkx2-2P42586 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Gm8213-201ENSMUST00000118191 441 ntBASIC12.09□□□□□ -0.47
Nkx2-2P42586 Gm15806-201ENSMUST00000120696 955 ntBASIC12.09□□□□□ -0.47
Nkx2-2P42586 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Gm6244-201ENSMUST00000178732 841 ntBASIC12.09□□□□□ -0.47
Nkx2-2P42586 Proscos-202ENSMUST00000178990 666 ntBASIC12.09□□□□□ -0.47
Nkx2-2P42586 Gm27892-201ENSMUST00000185017 106 ntBASIC12.09□□□□□ -0.47
Nkx2-2P42586 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.09□□□□□ -0.47
Nkx2-2P42586 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.09□□□□□ -0.47
Nkx2-2P42586 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Gm5356-201ENSMUST00000093326 615 ntBASIC12.09□□□□□ -0.47
Nkx2-2P42586 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-2P42586 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Nkx2-2P42586 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.08□□□□□ -0.47
Nkx2-2P42586 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Nkx2-2P42586 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.08□□□□□ -0.48
Nkx2-2P42586 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Gm10156-201ENSMUST00000122364 462 ntBASIC12.08□□□□□ -0.48
Nkx2-2P42586 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.08□□□□□ -0.48
Nkx2-2P42586 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.08□□□□□ -0.48
Nkx2-2P42586 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.08□□□□□ -0.48
Nkx2-2P42586 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.08□□□□□ -0.48
Nkx2-2P42586 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Gm17794-201ENSMUST00000220252 955 ntBASIC12.08□□□□□ -0.48
Nkx2-2P42586 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.08□□□□□ -0.48
Nkx2-2P42586 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nkx2-2P42586 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms