Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Cxcl12P40224 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cxcl12P40224 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.51□□□□□ -0.25
Cxcl12P40224 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.5□□□□□ -0.25
Cxcl12P40224 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cxcl12P40224 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cxcl12P40224 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.5□□□□□ -0.25
Cxcl12P40224 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.5□□□□□ -0.25
Cxcl12P40224 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cxcl12P40224 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.5□□□□□ -0.25
Cxcl12P40224 Gm19459-201ENSMUST00000176240 835 ntBASIC13.5□□□□□ -0.25
Cxcl12P40224 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.5□□□□□ -0.25
Cxcl12P40224 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.5□□□□□ -0.25
Cxcl12P40224 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.5□□□□□ -0.25
Cxcl12P40224 Gm7848-201ENSMUST00000210739 718 ntBASIC13.5□□□□□ -0.25
Cxcl12P40224 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.5□□□□□ -0.25
Cxcl12P40224 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Gzmn-202ENSMUST00000225535 989 ntBASIC13.5□□□□□ -0.25
Cxcl12P40224 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cxcl12P40224 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cxcl12P40224 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.5□□□□□ -0.25
Cxcl12P40224 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.5□□□□□ -0.25
Cxcl12P40224 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cxcl12P40224 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cxcl12P40224 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.49□□□□□ -0.25
Cxcl12P40224 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.49□□□□□ -0.25
Cxcl12P40224 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cxcl12P40224 Gm13408-201ENSMUST00000119822 798 ntBASIC13.49□□□□□ -0.25
Cxcl12P40224 Gm11597-201ENSMUST00000121423 964 ntBASIC13.49□□□□□ -0.25
Cxcl12P40224 Gm13935-201ENSMUST00000121859 798 ntBASIC13.49□□□□□ -0.25
Cxcl12P40224 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.49□□□□□ -0.25
Cxcl12P40224 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.49□□□□□ -0.25
Cxcl12P40224 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
Cxcl12P40224 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.49□□□□□ -0.25
Cxcl12P40224 Gm37201-201ENSMUST00000191845 523 ntBASIC13.49□□□□□ -0.25
Cxcl12P40224 Gm7003-201ENSMUST00000195089 312 ntBASIC13.49□□□□□ -0.25
Cxcl12P40224 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.49□□□□□ -0.25
Cxcl12P40224 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.49□□□□□ -0.25
Cxcl12P40224 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.49□□□□□ -0.25
Cxcl12P40224 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.49□□□□□ -0.25
Cxcl12P40224 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.49□□□□□ -0.25
Cxcl12P40224 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cxcl12P40224 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Cxcl12P40224 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cxcl12P40224 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.48□□□□□ -0.25
Cxcl12P40224 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cxcl12P40224 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cxcl12P40224 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cxcl12P40224 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms