Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Timp3P39876 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Timp3P39876 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Timp3P39876 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Timp3P39876 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.84□□□□□ -0.67
Timp3P39876 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Timp3P39876 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Timp3P39876 Gm45638-201ENSMUST00000211507 2878 ntBASIC10.84□□□□□ -0.67
Timp3P39876 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC10.84□□□□□ -0.67
Timp3P39876 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Timp3P39876 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Timp3P39876 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Timp3P39876 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Mir1938-201ENSMUST00000158746 100 ntBASIC10.84□□□□□ -0.67
Timp3P39876 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.84□□□□□ -0.67
Timp3P39876 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.84□□□□□ -0.67
Timp3P39876 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Timp3P39876 Gm29649-201ENSMUST00000185649 419 ntBASIC10.84□□□□□ -0.67
Timp3P39876 Gm38144-201ENSMUST00000192790 465 ntBASIC10.84□□□□□ -0.67
Timp3P39876 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.84□□□□□ -0.67
Timp3P39876 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.84□□□□□ -0.67
Timp3P39876 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC10.84□□□□□ -0.67
Timp3P39876 Gm17330-201ENSMUST00000221047 165 ntBASIC10.84□□□□□ -0.67
Timp3P39876 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Timp3P39876 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Timp3P39876 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.84□□□□□ -0.67
Timp3P39876 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Timp3P39876 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Timp3P39876 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.84□□□□□ -0.67
Timp3P39876 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Timp3P39876 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Timp3P39876 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Timp3P39876 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Timp3P39876 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.84□□□□□ -0.67
Timp3P39876 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Timp3P39876 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Timp3P39876 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Timp3P39876 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Gm7114-201ENSMUST00000190159 1789 ntBASIC10.83□□□□□ -0.68
Timp3P39876 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Timp3P39876 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.83□□□□□ -0.68
Timp3P39876 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC10.83□□□□□ -0.68
Timp3P39876 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Gm15770-201ENSMUST00000117498 584 ntBASIC10.83□□□□□ -0.68
Timp3P39876 Trav4d-2-201ENSMUST00000120914 335 ntBASIC10.83□□□□□ -0.68
Timp3P39876 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC10.83□□□□□ -0.68
Timp3P39876 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.83□□□□□ -0.68
Timp3P39876 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Timp3P39876 Gm8652-201ENSMUST00000181363 964 ntBASIC10.83□□□□□ -0.68
Timp3P39876 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10.83□□□□□ -0.68
Timp3P39876 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.83□□□□□ -0.68
Timp3P39876 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Timp3P39876 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.83□□□□□ -0.68
Timp3P39876 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.83□□□□□ -0.68
Timp3P39876 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC10.83□□□□□ -0.68
Timp3P39876 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Timp3P39876 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Timp3P39876 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms