Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs1P35441 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs1P35441 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs1P35441 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.25□□□□□ -0.45
Thbs1P35441 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.25□□□□□ -0.45
Thbs1P35441 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs1P35441 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Thbs1P35441 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs1P35441 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Thbs1P35441 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs1P35441 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Thbs1P35441 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.24□□□□□ -0.45
Thbs1P35441 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Thbs1P35441 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Thbs1P35441 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Thbs1P35441 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.24□□□□□ -0.45
Thbs1P35441 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.24□□□□□ -0.45
Thbs1P35441 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.24□□□□□ -0.45
Thbs1P35441 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.24□□□□□ -0.45
Thbs1P35441 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.24□□□□□ -0.45
Thbs1P35441 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.24□□□□□ -0.45
Thbs1P35441 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC12.24□□□□□ -0.45
Thbs1P35441 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 AC132446.1-201ENSMUST00000222655 226 ntBASIC12.24□□□□□ -0.45
Thbs1P35441 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.24□□□□□ -0.45
Thbs1P35441 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Thbs1P35441 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Thbs1P35441 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Thbs1P35441 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.23□□□□□ -0.45
Thbs1P35441 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Thbs1P35441 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Thbs1P35441 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Thbs1P35441 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 AC107452.3-201ENSMUST00000228807 1308 ntBASIC12.23□□□□□ -0.45
Thbs1P35441 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.23□□□□□ -0.45
Thbs1P35441 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.23□□□□□ -0.45
Thbs1P35441 Gm23958-201ENSMUST00000157207 105 ntBASIC12.23□□□□□ -0.45
Thbs1P35441 Gm22885-201ENSMUST00000157410 107 ntBASIC12.23□□□□□ -0.45
Thbs1P35441 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.23□□□□□ -0.45
Thbs1P35441 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.23□□□□□ -0.45
Thbs1P35441 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.23□□□□□ -0.45
Thbs1P35441 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Gm7653-201ENSMUST00000214567 508 ntBASIC12.23□□□□□ -0.45
Thbs1P35441 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.23□□□□□ -0.45
Thbs1P35441 Gm6218-201ENSMUST00000219812 628 ntBASIC12.23□□□□□ -0.45
Thbs1P35441 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.23□□□□□ -0.45
Thbs1P35441 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.23□□□□□ -0.45
Thbs1P35441 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Thbs1P35441 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Thbs1P35441 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Thbs1P35441 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms