Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sftpa1P35242 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sftpa1P35242 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Sftpa1P35242 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Gm43947-201ENSMUST00000203019 959 ntBASIC12.17□□□□□ -0.46
Sftpa1P35242 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.17□□□□□ -0.46
Sftpa1P35242 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sftpa1P35242 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sftpa1P35242 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sftpa1P35242 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.17□□□□□ -0.46
Sftpa1P35242 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.17□□□□□ -0.46
Sftpa1P35242 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sftpa1P35242 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sftpa1P35242 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sftpa1P35242 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sftpa1P35242 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Gm25214-201ENSMUST00000104573 129 ntBASIC12.16□□□□□ -0.46
Sftpa1P35242 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.16□□□□□ -0.46
Sftpa1P35242 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sftpa1P35242 Gm14208-201ENSMUST00000119645 678 ntBASIC12.16□□□□□ -0.46
Sftpa1P35242 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.16□□□□□ -0.46
Sftpa1P35242 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Gm6458-201ENSMUST00000211573 635 ntBASIC12.16□□□□□ -0.46
Sftpa1P35242 Gm19208-201ENSMUST00000213861 912 ntBASIC12.16□□□□□ -0.46
Sftpa1P35242 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.16□□□□□ -0.46
Sftpa1P35242 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.16□□□□□ -0.46
Sftpa1P35242 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sftpa1P35242 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sftpa1P35242 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Sftpa1P35242 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sftpa1P35242 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Sftpa1P35242 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.15□□□□□ -0.46
Sftpa1P35242 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.15□□□□□ -0.46
Sftpa1P35242 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.15□□□□□ -0.46
Sftpa1P35242 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Sftpa1P35242 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.15□□□□□ -0.46
Sftpa1P35242 Gm14130-201ENSMUST00000118417 987 ntBASIC12.15□□□□□ -0.46
Sftpa1P35242 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.15□□□□□ -0.46
Sftpa1P35242 Gm13097-201ENSMUST00000210722 397 ntBASIC12.15□□□□□ -0.46
Sftpa1P35242 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.15□□□□□ -0.46
Sftpa1P35242 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.15□□□□□ -0.46
Sftpa1P35242 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sftpa1P35242 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sftpa1P35242 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sftpa1P35242 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.15□□□□□ -0.47
Sftpa1P35242 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Sftpa1P35242 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms