Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cbx3P23198 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cbx3P23198 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12□□□□□ -0.49
Cbx3P23198 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12□□□□□ -0.49
Cbx3P23198 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cbx3P23198 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cbx3P23198 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12□□□□□ -0.49
Cbx3P23198 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cbx3P23198 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cbx3P23198 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12□□□□□ -0.49
Cbx3P23198 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12□□□□□ -0.49
Cbx3P23198 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cbx3P23198 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Cbx3P23198 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12□□□□□ -0.49
Cbx3P23198 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12□□□□□ -0.49
Cbx3P23198 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Cbx3P23198 Gm2272-201ENSMUST00000194903 582 ntBASIC12□□□□□ -0.49
Cbx3P23198 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cbx3P23198 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cbx3P23198 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Cbx3P23198 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12□□□□□ -0.49
Cbx3P23198 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Cbx3P23198 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12□□□□□ -0.49
Cbx3P23198 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Tcf21-202ENSMUST00000218002 1788 ntBASIC12□□□□□ -0.49
Cbx3P23198 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cbx3P23198 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.99□□□□□ -0.49
Cbx3P23198 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cbx3P23198 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cbx3P23198 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.99□□□□□ -0.49
Cbx3P23198 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.99□□□□□ -0.49
Cbx3P23198 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.99□□□□□ -0.49
Cbx3P23198 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.99□□□□□ -0.49
Cbx3P23198 Gm9182-201ENSMUST00000217829 639 ntBASIC11.99□□□□□ -0.49
Cbx3P23198 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.99□□□□□ -0.49
Cbx3P23198 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cbx3P23198 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cbx3P23198 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms