Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.78□□□□□ -0.52
CcnkO88874 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Gm22175-201ENSMUST00000175007 78 ntBASIC11.78□□□□□ -0.52
CcnkO88874 Gm27321-201ENSMUST00000185021 205 ntBASIC11.78□□□□□ -0.52
CcnkO88874 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.78□□□□□ -0.52
CcnkO88874 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.78□□□□□ -0.52
CcnkO88874 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
CcnkO88874 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.78□□□□□ -0.52
CcnkO88874 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
CcnkO88874 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
CcnkO88874 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
CcnkO88874 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
CcnkO88874 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.77□□□□□ -0.53
CcnkO88874 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CcnkO88874 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.77□□□□□ -0.53
CcnkO88874 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.77□□□□□ -0.53
CcnkO88874 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.77□□□□□ -0.53
CcnkO88874 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.77□□□□□ -0.53
CcnkO88874 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.77□□□□□ -0.53
CcnkO88874 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CcnkO88874 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CcnkO88874 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
CcnkO88874 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CcnkO88874 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CcnkO88874 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CcnkO88874 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.76□□□□□ -0.53
CcnkO88874 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CcnkO88874 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms