Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Ubr1O70481 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Gm12015-201ENSMUST00000117065 843 ntBASIC16.79■□□□□ 0.28
Ubr1O70481 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ubr1O70481 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Gm32999-201ENSMUST00000192693 562 ntBASIC16.79■□□□□ 0.28
Ubr1O70481 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC16.79■□□□□ 0.28
Ubr1O70481 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.79■□□□□ 0.28
Ubr1O70481 Gm44401-201ENSMUST00000204462 2375 ntBASIC16.79■□□□□ 0.28
Ubr1O70481 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16.79■□□□□ 0.28
Ubr1O70481 Gm13996-201ENSMUST00000118456 430 ntBASIC16.79■□□□□ 0.28
Ubr1O70481 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC16.79■□□□□ 0.28
Ubr1O70481 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC16.79■□□□□ 0.28
Ubr1O70481 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ubr1O70481 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC16.79■□□□□ 0.28
Ubr1O70481 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ubr1O70481 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ubr1O70481 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ubr1O70481 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Ubr1O70481 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Ubr1O70481 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC16.78■□□□□ 0.28
Ubr1O70481 Gm22334-201ENSMUST00000158070 133 ntBASIC16.78■□□□□ 0.28
Ubr1O70481 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC16.78■□□□□ 0.28
Ubr1O70481 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ubr1O70481 Gm14267-206ENSMUST00000226870 1209 ntBASIC16.78■□□□□ 0.28
Ubr1O70481 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC16.78■□□□□ 0.28
Ubr1O70481 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC16.78■□□□□ 0.28
Ubr1O70481 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ubr1O70481 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC16.78■□□□□ 0.28
Ubr1O70481 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ubr1O70481 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ubr1O70481 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.77■□□□□ 0.28
Ubr1O70481 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC16.77■□□□□ 0.28
Ubr1O70481 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ubr1O70481 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ubr1O70481 Gm5884-201ENSMUST00000036712 1479 ntBASIC16.77■□□□□ 0.28
Ubr1O70481 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ubr1O70481 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ubr1O70481 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ubr1O70481 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ubr1O70481 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC16.77■□□□□ 0.28
Ubr1O70481 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ubr1O70481 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ubr1O70481 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ubr1O70481 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ubr1O70481 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ubr1O70481 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ubr1O70481 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ubr1O70481 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ubr1O70481 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ubr1O70481 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ubr1O70481 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.77■□□□□ 0.27
Ubr1O70481 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ubr1O70481 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ubr1O70481 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms