Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC16.07■□□□□ 0.16
Mmp8O70138 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.07■□□□□ 0.16
Mmp8O70138 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Gm16177-201ENSMUST00000120728 718 ntBASIC16.07■□□□□ 0.16
Mmp8O70138 Gm16479-201ENSMUST00000121706 932 ntBASIC16.07■□□□□ 0.16
Mmp8O70138 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16.07■□□□□ 0.16
Mmp8O70138 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Mmp8O70138 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Mmp8O70138 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.07■□□□□ 0.16
Mmp8O70138 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC16.07■□□□□ 0.16
Mmp8O70138 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Mmp8O70138 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Mmp8O70138 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.07■□□□□ 0.16
Mmp8O70138 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Mmp8O70138 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Mmp8O70138 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Mmp8O70138 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Mmp8O70138 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
Mmp8O70138 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Mmp8O70138 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Mmp8O70138 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Mmp8O70138 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Mmp8O70138 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC16.06■□□□□ 0.16
Mmp8O70138 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.06■□□□□ 0.16
Mmp8O70138 Gm7029-201ENSMUST00000173226 450 ntBASIC16.06■□□□□ 0.16
Mmp8O70138 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Gm6266-201ENSMUST00000203844 806 ntBASIC16.06■□□□□ 0.16
Mmp8O70138 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Mmp8O70138 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.06■□□□□ 0.16
Mmp8O70138 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Mmp8O70138 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp8O70138 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Mmp8O70138 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp8O70138 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp8O70138 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.05■□□□□ 0.16
Mmp8O70138 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp8O70138 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Mmp8O70138 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.05■□□□□ 0.16
Mmp8O70138 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp8O70138 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC16.05■□□□□ 0.16
Mmp8O70138 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC16.05■□□□□ 0.16
Mmp8O70138 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC16.05■□□□□ 0.16
Mmp8O70138 AC114008.2-201ENSMUST00000227699 1347 ntBASIC16.05■□□□□ 0.16
Mmp8O70138 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp8O70138 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp8O70138 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp8O70138 Gm12539-201ENSMUST00000121549 1098 ntBASIC16.05■□□□□ 0.16
Mmp8O70138 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp8O70138 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp8O70138 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.05■□□□□ 0.16
Mmp8O70138 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Mmp8O70138 AC166051.1-201ENSMUST00000214313 210 ntBASIC16.05■□□□□ 0.16
Mmp8O70138 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp8O70138 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp8O70138 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp8O70138 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp8O70138 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp8O70138 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms