Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Pde6dO55057 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.41□□□□□ -0.74
Pde6dO55057 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Pde6dO55057 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.41□□□□□ -0.74
Pde6dO55057 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.41□□□□□ -0.74
Pde6dO55057 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Pde6dO55057 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.41□□□□□ -0.74
Pde6dO55057 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Pde6dO55057 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Pde6dO55057 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.4□□□□□ -0.74
Pde6dO55057 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Pde6dO55057 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Pde6dO55057 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Pde6dO55057 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Pde6dO55057 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Gm19931-201ENSMUST00000198920 368 ntBASIC10.4□□□□□ -0.74
Pde6dO55057 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC10.4□□□□□ -0.74
Pde6dO55057 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.4□□□□□ -0.74
Pde6dO55057 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.4□□□□□ -0.74
Pde6dO55057 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Pde6dO55057 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Pde6dO55057 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Pde6dO55057 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC10.4□□□□□ -0.75
Pde6dO55057 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pde6dO55057 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pde6dO55057 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Pde6dO55057 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Pde6dO55057 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Pde6dO55057 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.39□□□□□ -0.75
Pde6dO55057 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.39□□□□□ -0.75
Pde6dO55057 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.39□□□□□ -0.75
Pde6dO55057 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
Pde6dO55057 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.39□□□□□ -0.75
Pde6dO55057 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Pde6dO55057 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Pde6dO55057 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Pde6dO55057 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Pde6dO55057 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Pde6dO55057 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.39□□□□□ -0.75
Pde6dO55057 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.39□□□□□ -0.75
Pde6dO55057 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Gm6973-201ENSMUST00000117080 721 ntBASIC10.39□□□□□ -0.75
Pde6dO55057 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC10.39□□□□□ -0.75
Pde6dO55057 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Pde6dO55057 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.39□□□□□ -0.75
Pde6dO55057 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC10.39□□□□□ -0.75
Pde6dO55057 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC10.39□□□□□ -0.75
Pde6dO55057 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.39□□□□□ -0.75
Pde6dO55057 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Pde6dO55057 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms