Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdmt1O55055 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trdmt1O55055 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trdmt1O55055 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdmt1O55055 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.48□□□□□ -0.09
Trdmt1O55055 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdmt1O55055 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdmt1O55055 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.48□□□□□ -0.09
Trdmt1O55055 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trdmt1O55055 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trdmt1O55055 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trdmt1O55055 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trdmt1O55055 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trdmt1O55055 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Gm25214-201ENSMUST00000104573 129 ntBASIC14.47□□□□□ -0.09
Trdmt1O55055 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.47□□□□□ -0.09
Trdmt1O55055 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.47□□□□□ -0.09
Trdmt1O55055 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Trdmt1O55055 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.47□□□□□ -0.09
Trdmt1O55055 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.47□□□□□ -0.09
Trdmt1O55055 Mir7221-201ENSMUST00000184009 72 ntBASIC14.47□□□□□ -0.09
Trdmt1O55055 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.47□□□□□ -0.09
Trdmt1O55055 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.47□□□□□ -0.09
Trdmt1O55055 Gm13097-201ENSMUST00000210722 397 ntBASIC14.47□□□□□ -0.09
Trdmt1O55055 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.47□□□□□ -0.09
Trdmt1O55055 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.47□□□□□ -0.09
Trdmt1O55055 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trdmt1O55055 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.47□□□□□ -0.09
Trdmt1O55055 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trdmt1O55055 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trdmt1O55055 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trdmt1O55055 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trdmt1O55055 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.46□□□□□ -0.09
Trdmt1O55055 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Gm14017-201ENSMUST00000121934 386 ntBASIC14.46□□□□□ -0.09
Trdmt1O55055 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.46□□□□□ -0.09
Trdmt1O55055 Rps4l-202ENSMUST00000204242 789 ntBASIC14.46□□□□□ -0.09
Trdmt1O55055 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.46□□□□□ -0.09
Trdmt1O55055 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trdmt1O55055 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Trdmt1O55055 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Trdmt1O55055 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trdmt1O55055 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trdmt1O55055 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.46□□□□□ -0.1
Trdmt1O55055 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trdmt1O55055 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trdmt1O55055 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Trdmt1O55055 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Trdmt1O55055 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trdmt1O55055 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.45□□□□□ -0.1
Trdmt1O55055 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.45□□□□□ -0.1
Trdmt1O55055 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trdmt1O55055 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Trdmt1O55055 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.45□□□□□ -0.1
Trdmt1O55055 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.45□□□□□ -0.1
Trdmt1O55055 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms