Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.63□□□□□ -0.07
Sptlc1O35704 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sptlc1O35704 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC14.63□□□□□ -0.07
Sptlc1O35704 Gm37809-201ENSMUST00000195050 931 ntBASIC14.63□□□□□ -0.07
Sptlc1O35704 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.63□□□□□ -0.07
Sptlc1O35704 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.63□□□□□ -0.07
Sptlc1O35704 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.63□□□□□ -0.07
Sptlc1O35704 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Sptlc1O35704 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Sptlc1O35704 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sptlc1O35704 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Sptlc1O35704 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sptlc1O35704 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.63□□□□□ -0.07
Sptlc1O35704 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sptlc1O35704 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.63□□□□□ -0.07
Sptlc1O35704 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sptlc1O35704 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sptlc1O35704 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
Sptlc1O35704 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sptlc1O35704 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sptlc1O35704 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sptlc1O35704 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sptlc1O35704 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Sptlc1O35704 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sptlc1O35704 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sptlc1O35704 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.62□□□□□ -0.07
Sptlc1O35704 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sptlc1O35704 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Sptlc1O35704 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.62□□□□□ -0.07
Sptlc1O35704 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
Sptlc1O35704 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.62□□□□□ -0.07
Sptlc1O35704 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Gm6222-202ENSMUST00000182143 629 ntBASIC14.62□□□□□ -0.07
Sptlc1O35704 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Gm36966-201ENSMUST00000192217 413 ntBASIC14.62□□□□□ -0.07
Sptlc1O35704 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC14.62□□□□□ -0.07
Sptlc1O35704 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Sptlc1O35704 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC14.62□□□□□ -0.07
Sptlc1O35704 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.62□□□□□ -0.07
Sptlc1O35704 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Sptlc1O35704 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sptlc1O35704 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Sptlc1O35704 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Sptlc1O35704 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.62□□□□□ -0.07
Sptlc1O35704 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Sptlc1O35704 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.61□□□□□ -0.07
Sptlc1O35704 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sptlc1O35704 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sptlc1O35704 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sptlc1O35704 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sptlc1O35704 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sptlc1O35704 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.61□□□□□ -0.07
Sptlc1O35704 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sptlc1O35704 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sptlc1O35704 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sptlc1O35704 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sptlc1O35704 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sptlc1O35704 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sptlc1O35704 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.61□□□□□ -0.07
Sptlc1O35704 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Sptlc1O35704 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.61□□□□□ -0.07
Sptlc1O35704 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sptlc1O35704 Gm16202-201ENSMUST00000117532 544 ntBASIC14.61□□□□□ -0.07
Sptlc1O35704 Gm11793-201ENSMUST00000120433 981 ntBASIC14.61□□□□□ -0.07
Sptlc1O35704 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.61□□□□□ -0.07
Sptlc1O35704 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC14.61□□□□□ -0.07
Sptlc1O35704 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC14.61□□□□□ -0.07
Sptlc1O35704 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sptlc1O35704 Gm28180-201ENSMUST00000189608 722 ntBASIC14.61□□□□□ -0.07
Sptlc1O35704 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sptlc1O35704 CT025526.1-201ENSMUST00000217327 267 ntBASIC14.61□□□□□ -0.07
Sptlc1O35704 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.61□□□□□ -0.07
Sptlc1O35704 CT025538.2-201ENSMUST00000226083 772 ntBASIC14.61□□□□□ -0.07
Sptlc1O35704 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sptlc1O35704 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sptlc1O35704 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sptlc1O35704 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms