Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Slc1a6O35544 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.01□□□□□ -0.33
Slc1a6O35544 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.01□□□□□ -0.33
Slc1a6O35544 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Slc1a6O35544 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.01□□□□□ -0.33
Slc1a6O35544 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.01□□□□□ -0.33
Slc1a6O35544 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.01□□□□□ -0.33
Slc1a6O35544 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Slc1a6O35544 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.01□□□□□ -0.33
Slc1a6O35544 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Slc1a6O35544 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Slc1a6O35544 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13□□□□□ -0.33
Slc1a6O35544 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13□□□□□ -0.33
Slc1a6O35544 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13□□□□□ -0.33
Slc1a6O35544 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13□□□□□ -0.33
Slc1a6O35544 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Gm38144-201ENSMUST00000192790 465 ntBASIC13□□□□□ -0.33
Slc1a6O35544 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Slc1a6O35544 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Slc1a6O35544 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Slc1a6O35544 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.99□□□□□ -0.33
Slc1a6O35544 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Slc1a6O35544 Gm27680-201ENSMUST00000184192 160 ntBASIC12.99□□□□□ -0.33
Slc1a6O35544 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.99□□□□□ -0.33
Slc1a6O35544 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Gm44344-201ENSMUST00000200287 129 ntBASIC12.99□□□□□ -0.33
Slc1a6O35544 Gm5312-201ENSMUST00000203728 547 ntBASIC12.99□□□□□ -0.33
Slc1a6O35544 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Gm5161-201ENSMUST00000075243 853 ntBASIC12.99□□□□□ -0.33
Slc1a6O35544 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.99□□□□□ -0.33
Slc1a6O35544 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Slc1a6O35544 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slc1a6O35544 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc1a6O35544 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc1a6O35544 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc1a6O35544 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc1a6O35544 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slc1a6O35544 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc1a6O35544 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc1a6O35544 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc1a6O35544 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc1a6O35544 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc1a6O35544 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slc1a6O35544 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.98□□□□□ -0.33
Slc1a6O35544 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms