Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm15920-201ENSMUST00000118998 402 ntBASIC10.45□□□□□ -0.74
Efnb3O35393 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.45□□□□□ -0.74
Efnb3O35393 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.45□□□□□ -0.74
Efnb3O35393 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Efnb3O35393 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC10.45□□□□□ -0.74
Efnb3O35393 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC10.45□□□□□ -0.74
Efnb3O35393 Gm29541-201ENSMUST00000191351 678 ntBASIC10.45□□□□□ -0.74
Efnb3O35393 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC10.45□□□□□ -0.74
Efnb3O35393 AC124732.2-201ENSMUST00000221977 316 ntBASIC10.45□□□□□ -0.74
Efnb3O35393 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Efnb3O35393 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Efnb3O35393 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Efnb3O35393 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.45□□□□□ -0.74
Efnb3O35393 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Efnb3O35393 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Efnb3O35393 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Efnb3O35393 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Efnb3O35393 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Efnb3O35393 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.44□□□□□ -0.74
Efnb3O35393 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.44□□□□□ -0.74
Efnb3O35393 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Gm24420-201ENSMUST00000176676 59 ntBASIC10.44□□□□□ -0.74
Efnb3O35393 Gm25144-201ENSMUST00000179561 110 ntBASIC10.44□□□□□ -0.74
Efnb3O35393 Gm25352-201ENSMUST00000179815 110 ntBASIC10.44□□□□□ -0.74
Efnb3O35393 Gm4804-201ENSMUST00000182234 999 ntBASIC10.44□□□□□ -0.74
Efnb3O35393 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.44□□□□□ -0.74
Efnb3O35393 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Efnb3O35393 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.44□□□□□ -0.74
Efnb3O35393 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.44□□□□□ -0.74
Efnb3O35393 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Efnb3O35393 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Efnb3O35393 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Efnb3O35393 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.43□□□□□ -0.74
Efnb3O35393 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC10.43□□□□□ -0.74
Efnb3O35393 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC10.43□□□□□ -0.74
Efnb3O35393 Gm24543-201ENSMUST00000103867 82 ntBASIC10.43□□□□□ -0.74
Efnb3O35393 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC10.43□□□□□ -0.74
Efnb3O35393 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.43□□□□□ -0.74
Efnb3O35393 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Efnb3O35393 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC10.43□□□□□ -0.74
Efnb3O35393 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms