Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.74□□□□□ -0.21
Ebf3O08791 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.74□□□□□ -0.21
Ebf3O08791 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ebf3O08791 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ebf3O08791 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.73□□□□□ -0.21
Ebf3O08791 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ebf3O08791 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.73□□□□□ -0.21
Ebf3O08791 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Ebf3O08791 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.73□□□□□ -0.21
Ebf3O08791 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.73□□□□□ -0.21
Ebf3O08791 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Gm14723-201ENSMUST00000118686 215 ntBASIC13.73□□□□□ -0.21
Ebf3O08791 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Mir8109-201ENSMUST00000184375 117 ntBASIC13.73□□□□□ -0.21
Ebf3O08791 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.73□□□□□ -0.21
Ebf3O08791 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.73□□□□□ -0.21
Ebf3O08791 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
Ebf3O08791 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.73□□□□□ -0.21
Ebf3O08791 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.73□□□□□ -0.21
Ebf3O08791 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.73□□□□□ -0.21
Ebf3O08791 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.73□□□□□ -0.21
Ebf3O08791 Gm10268-201ENSMUST00000085340 555 ntBASIC13.73□□□□□ -0.21
Ebf3O08791 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Ebf3O08791 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ebf3O08791 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ebf3O08791 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Ebf3O08791 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.72□□□□□ -0.21
Ebf3O08791 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.72□□□□□ -0.21
Ebf3O08791 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.72□□□□□ -0.21
Ebf3O08791 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ebf3O08791 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ebf3O08791 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ebf3O08791 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Ebf3O08791 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.72□□□□□ -0.21
Ebf3O08791 Gm27516-201ENSMUST00000184237 98 ntBASIC13.72□□□□□ -0.21
Ebf3O08791 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Gm37922-201ENSMUST00000195596 455 ntBASIC13.72□□□□□ -0.21
Ebf3O08791 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.72□□□□□ -0.21
Ebf3O08791 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Ebf3O08791 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ebf3O08791 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Ebf3O08791 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ebf3O08791 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.71□□□□□ -0.21
Ebf3O08791 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.71□□□□□ -0.21
Ebf3O08791 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ebf3O08791 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms