Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NpcdF8VQB8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NpcdF8VQB8 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC15.86■□□□□ 0.13
NpcdF8VQB8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Gm28450-201ENSMUST00000187349 638 ntBASIC15.86■□□□□ 0.13
NpcdF8VQB8 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.86■□□□□ 0.13
NpcdF8VQB8 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NpcdF8VQB8 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.85■□□□□ 0.13
NpcdF8VQB8 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.85■□□□□ 0.13
NpcdF8VQB8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Gm26361-201ENSMUST00000158868 186 ntBASIC15.85■□□□□ 0.13
NpcdF8VQB8 Gm20426-201ENSMUST00000173657 440 ntBASIC15.85■□□□□ 0.13
NpcdF8VQB8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC15.85■□□□□ 0.13
NpcdF8VQB8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NpcdF8VQB8 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Gm14208-201ENSMUST00000119645 678 ntBASIC15.84■□□□□ 0.13
NpcdF8VQB8 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.84■□□□□ 0.13
NpcdF8VQB8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.84■□□□□ 0.13
NpcdF8VQB8 Gm45118-201ENSMUST00000208928 825 ntBASIC15.84■□□□□ 0.13
NpcdF8VQB8 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
NpcdF8VQB8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms