Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cpsf4lE9Q2N0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Gm11803-201ENSMUST00000119966 444 ntBASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Gm11978-201ENSMUST00000122315 466 ntBASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Gm10012-201ENSMUST00000078252 192 ntBASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cpsf4lE9Q2N0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Gm10156-201ENSMUST00000122364 462 ntBASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cpsf4lE9Q2N0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms