Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Shank1D3YZU1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Gm14277-201ENSMUST00000121195 360 ntBASIC11.82□□□□□ -0.52
Shank1D3YZU1 Gm2231-201ENSMUST00000125661 612 ntBASIC11.82□□□□□ -0.52
Shank1D3YZU1 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Gm26185-201ENSMUST00000157692 266 ntBASIC11.82□□□□□ -0.52
Shank1D3YZU1 Gm28693-202ENSMUST00000190758 331 ntBASIC11.82□□□□□ -0.52
Shank1D3YZU1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Gm19163-201ENSMUST00000223313 780 ntBASIC11.82□□□□□ -0.52
Shank1D3YZU1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Shank1D3YZU1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Shank1D3YZU1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Gm14017-201ENSMUST00000121934 386 ntBASIC11.82□□□□□ -0.52
Shank1D3YZU1 Gm8584-201ENSMUST00000171982 758 ntBASIC11.82□□□□□ -0.52
Shank1D3YZU1 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Shank1D3YZU1 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 CT009718.3-201ENSMUST00000221116 367 ntBASIC11.82□□□□□ -0.52
Shank1D3YZU1 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Shank1D3YZU1 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.81□□□□□ -0.52
Shank1D3YZU1 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Snord83b-201ENSMUST00000104546 94 ntBASIC11.81□□□□□ -0.52
Shank1D3YZU1 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Gm13665-201ENSMUST00000120830 528 ntBASIC11.81□□□□□ -0.52
Shank1D3YZU1 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.81□□□□□ -0.52
Shank1D3YZU1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.81□□□□□ -0.52
Shank1D3YZU1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.81□□□□□ -0.52
Shank1D3YZU1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Shank1D3YZU1 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Gm23270-201ENSMUST00000104055 131 ntBASIC11.81□□□□□ -0.52
Shank1D3YZU1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Gm13570-201ENSMUST00000140763 309 ntBASIC11.81□□□□□ -0.52
Shank1D3YZU1 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.81□□□□□ -0.52
Shank1D3YZU1 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms