Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Brpf3B2KF05 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Brpf3B2KF05 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.64□□□□□ -0.07
Brpf3B2KF05 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Gm17330-201ENSMUST00000221047 165 ntBASIC14.64□□□□□ -0.07
Brpf3B2KF05 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.64□□□□□ -0.07
Brpf3B2KF05 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.64□□□□□ -0.07
Brpf3B2KF05 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.64□□□□□ -0.07
Brpf3B2KF05 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Brpf3B2KF05 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brpf3B2KF05 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.63□□□□□ -0.07
Brpf3B2KF05 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Gm6415-201ENSMUST00000118488 348 ntBASIC14.63□□□□□ -0.07
Brpf3B2KF05 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.63□□□□□ -0.07
Brpf3B2KF05 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.63□□□□□ -0.07
Brpf3B2KF05 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Brpf3B2KF05 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Brpf3B2KF05 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Brpf3B2KF05 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Brpf3B2KF05 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.62□□□□□ -0.07
Brpf3B2KF05 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms