Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.72□□□□□ -0.53
Gm11127A7VMS2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.72□□□□□ -0.53
Gm11127A7VMS2 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Gm14701-201ENSMUST00000117156 348 ntBASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Gm26308-201ENSMUST00000157768 69 ntBASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.71□□□□□ -0.53
Gm11127A7VMS2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Gm11127A7VMS2 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gm11127A7VMS2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm11127A7VMS2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gm11127A7VMS2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.71□□□□□ -0.54
Gm11127A7VMS2 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm11127A7VMS2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm11127A7VMS2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Gm11127A7VMS2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm11127A7VMS2 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Gm11127A7VMS2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Gm28630-201ENSMUST00000187806 498 ntBASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Gm33320-201ENSMUST00000192232 530 ntBASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Shd-206ENSMUST00000225145 998 ntBASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Gm11127A7VMS2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms