Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm19208-201ENSMUST00000213861 912 ntBASIC11.14□□□□□ -0.63
Col6a4A2AX52 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.14□□□□□ -0.63
Col6a4A2AX52 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.14□□□□□ -0.63
Col6a4A2AX52 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Col6a4A2AX52 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.13□□□□□ -0.63
Col6a4A2AX52 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.13□□□□□ -0.63
Col6a4A2AX52 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm2231-201ENSMUST00000125661 612 ntBASIC11.13□□□□□ -0.63
Col6a4A2AX52 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm13570-201ENSMUST00000140763 309 ntBASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm8738-201ENSMUST00000172606 329 ntBASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.13□□□□□ -0.63
Col6a4A2AX52 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm15276-201ENSMUST00000145953 498 ntBASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm37835-201ENSMUST00000193305 361 ntBASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.13□□□□□ -0.63
Col6a4A2AX52 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.13□□□□□ -0.63
Col6a4A2AX52 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Col6a4A2AX52 AC139054.1-201ENSMUST00000226898 1598 ntBASIC11.12□□□□□ -0.63
Col6a4A2AX52 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.12□□□□□ -0.63
Col6a4A2AX52 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Col6a4A2AX52 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms