Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Gm21854-201ENSMUST00000179901 471 ntBASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Gm5279-201ENSMUST00000199575 745 ntBASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Gm9797-201ENSMUST00000052902 613 ntBASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.16□□□□□ -0.3
Ccdc194A0A140LIT1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Gm43094-201ENSMUST00000196549 921 ntBASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Gm44872-201ENSMUST00000207864 420 ntBASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc194A0A140LIT1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc194A0A140LIT1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc194A0A140LIT1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ccdc194A0A140LIT1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc194A0A140LIT1 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc194A0A140LIT1 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc194A0A140LIT1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc194A0A140LIT1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc194A0A140LIT1 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ccdc194A0A140LIT1 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc194A0A140LIT1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.14□□□□□ -0.31
Ccdc194A0A140LIT1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc194A0A140LIT1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc194A0A140LIT1 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ccdc194A0A140LIT1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms