Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Mir3113-201ENSMUST00000175478 76 ntBASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm45612-201ENSMUST00000211320 160 ntBASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Mzt1-203ENSMUST00000227948 952 ntBASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm1401-201ENSMUST00000122048 772 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm3809-201ENSMUST00000180973 1006 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm29310-201ENSMUST00000185468 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21825-201ENSMUST00000185728 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm29109-201ENSMUST00000185895 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21896-201ENSMUST00000186520 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21873-201ENSMUST00000186728 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21794-201ENSMUST00000187056 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21880-201ENSMUST00000187275 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21826-201ENSMUST00000187451 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21198-201ENSMUST00000188393 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21749-201ENSMUST00000189343 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21901-201ENSMUST00000189568 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm29424-201ENSMUST00000189716 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm28599-201ENSMUST00000189838 694 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21867-201ENSMUST00000189917 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm29269-201ENSMUST00000190087 696 ntBASIC9.99□□□□□ -0.81
Trav3n-3A0A0G2JEM0 Gm21722-201ENSMUST00000190153 696 ntBASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms