Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Gm9522-201ENSMUST00000182394 926 ntBASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Gm27306-201ENSMUST00000183970 107 ntBASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav5-4A0A075B652 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Trav5-4A0A075B652 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav5-4A0A075B652 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms