Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Gm15429-201ENSMUST00000151268 798 ntBASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Gm45668-201ENSMUST00000211271 493 ntBASIC13.23□□□□□ -0.29
H2afb2S4R1M3 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
H2afb2S4R1M3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb2S4R1M3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.21□□□□□ -0.29
H2afb2S4R1M3 Itm2b-204ENSMUST00000228637 783 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms