Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Upk1bQ9Z2C6 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk1bQ9Z2C6 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk1bQ9Z2C6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Upk1bQ9Z2C6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Upk1bQ9Z2C6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk1bQ9Z2C6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Gm24158-201ENSMUST00000175263 71 ntBASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Gm28630-201ENSMUST00000187806 498 ntBASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Upk1bQ9Z2C6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Gm12585-201ENSMUST00000117307 290 ntBASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Gm46209-201ENSMUST00000217912 553 ntBASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Gm17330-201ENSMUST00000221047 165 ntBASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Upk1bQ9Z2C6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Upk1bQ9Z2C6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms