Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.88□□□□□ -0.35
Lhx6Q9R1R0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Mir669p-2-201ENSMUST00000103868 87 ntBASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Mir669p-1-201ENSMUST00000103884 87 ntBASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Gm14263-201ENSMUST00000117955 746 ntBASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Gm21461-201ENSMUST00000200382 863 ntBASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Gm43093-201ENSMUST00000202439 1213 ntBASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Gm19169-201ENSMUST00000220109 1246 ntBASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Gm5161-201ENSMUST00000075243 853 ntBASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lhx6Q9R1R0 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Gm13732-201ENSMUST00000117753 535 ntBASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Gm15393-201ENSMUST00000120499 219 ntBASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Gm37230-201ENSMUST00000194491 818 ntBASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Gm42698-201ENSMUST00000197790 762 ntBASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Gm18330-201ENSMUST00000199246 547 ntBASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Gm42796-201ENSMUST00000199913 1087 ntBASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Gm42588-201ENSMUST00000200538 1297 ntBASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Olfr286-202ENSMUST00000205305 969 ntBASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 AC161250.1-201ENSMUST00000213426 1111 ntBASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 AC153532.1-201ENSMUST00000218126 1111 ntBASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.86□□□□□ -0.35
Lhx6Q9R1R0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx6Q9R1R0 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx6Q9R1R0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx6Q9R1R0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx6Q9R1R0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx6Q9R1R0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx6Q9R1R0 Arl14ep-202ENSMUST00000093883 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx6Q9R1R0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx6Q9R1R0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Lhx6Q9R1R0 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx6Q9R1R0 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx6Q9R1R0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lhx6Q9R1R0 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms