Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.81□□□□□ -0.2
Chmp2aQ9DB34 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.81□□□□□ -0.2
Chmp2aQ9DB34 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2aQ9DB34 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2aQ9DB34 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.81□□□□□ -0.2
Chmp2aQ9DB34 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2aQ9DB34 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.81□□□□□ -0.2
Chmp2aQ9DB34 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Chmp2aQ9DB34 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Chmp2aQ9DB34 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Gm9002-201ENSMUST00000178437 499 ntBASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Gm6244-201ENSMUST00000178732 841 ntBASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Gm27839-201ENSMUST00000184242 106 ntBASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Itm2b-204ENSMUST00000228637 783 ntBASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp2aQ9DB34 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2aQ9DB34 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2aQ9DB34 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Chmp2aQ9DB34 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2aQ9DB34 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp2aQ9DB34 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms