Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rsph9Q9D9V4 Gm10478-201ENSMUST00000084451 396 ntBASIC13□□□□□ -0.33
Rsph9Q9D9V4 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rsph9Q9D9V4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rsph9Q9D9V4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Rsph9Q9D9V4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rsph9Q9D9V4 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rsph9Q9D9V4 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rsph9Q9D9V4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rsph9Q9D9V4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rsph9Q9D9V4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rsph9Q9D9V4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rsph9Q9D9V4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13□□□□□ -0.33
Rsph9Q9D9V4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rsph9Q9D9V4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rsph9Q9D9V4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Gm16372-201ENSMUST00000073088 450 ntBASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rsph9Q9D9V4 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Gm27514-201ENSMUST00000183692 110 ntBASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Gm37922-201ENSMUST00000195596 455 ntBASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rsph9Q9D9V4 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rsph9Q9D9V4 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Rsph9Q9D9V4 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.97□□□□□ -0.33
Rsph9Q9D9V4 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms