Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Chmp5Q9D7S9 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Gm14767-201ENSMUST00000121559 586 ntBASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chmp5Q9D7S9 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.52■□□□□ 0.24
Chmp5Q9D7S9 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp5Q9D7S9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp5Q9D7S9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
Chmp5Q9D7S9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp5Q9D7S9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Chmp5Q9D7S9 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC16.52■□□□□ 0.24
Chmp5Q9D7S9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp5Q9D7S9 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.52■□□□□ 0.24
Chmp5Q9D7S9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC16.52■□□□□ 0.24
Chmp5Q9D7S9 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.52■□□□□ 0.24
Chmp5Q9D7S9 Gm6888-201ENSMUST00000221983 706 ntBASIC16.52■□□□□ 0.24
Chmp5Q9D7S9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC16.52■□□□□ 0.24
Chmp5Q9D7S9 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chmp5Q9D7S9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Chmp5Q9D7S9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp5Q9D7S9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp5Q9D7S9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp5Q9D7S9 Gm44241-201ENSMUST00000203230 1662 ntBASIC16.52■□□□□ 0.23
Chmp5Q9D7S9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp5Q9D7S9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp5Q9D7S9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Chmp5Q9D7S9 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Gm27430-201ENSMUST00000184585 107 ntBASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Gm44333-201ENSMUST00000197168 107 ntBASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Gm8396-201ENSMUST00000057361 823 ntBASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Gm24447-201ENSMUST00000083977 338 ntBASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Chmp5Q9D7S9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms