Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Mir686-201ENSMUST00000102174 109 ntBASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Gm12384-201ENSMUST00000119228 919 ntBASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Gm8062-201ENSMUST00000139696 444 ntBASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Gm6458-201ENSMUST00000211573 635 ntBASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rita1Q9D1H0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rita1Q9D1H0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rita1Q9D1H0 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.15□□□□□ -0.47
Rita1Q9D1H0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Gm37424-201ENSMUST00000191727 561 ntBASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Gm10268-201ENSMUST00000085340 555 ntBASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rita1Q9D1H0 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Snora78-201ENSMUST00000158630 128 ntBASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rita1Q9D1H0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms