Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.42□□□□□ -0.42
Chaf1bQ9D0N7 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Gm44335-201ENSMUST00000196879 141 ntBASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Gm44297-201ENSMUST00000198304 141 ntBASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Gm44346-201ENSMUST00000198851 141 ntBASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.41□□□□□ -0.42
Chaf1bQ9D0N7 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Gm5264-201ENSMUST00000190584 848 ntBASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chaf1bQ9D0N7 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Chaf1bQ9D0N7 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Chaf1bQ9D0N7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Chaf1bQ9D0N7 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Chaf1bQ9D0N7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Chaf1bQ9D0N7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chaf1bQ9D0N7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms