Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Mrpl55Q9CZ83 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gm13223-201ENSMUST00000118609 747 ntBASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gm12428-201ENSMUST00000119844 727 ntBASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gm13823-201ENSMUST00000119930 345 ntBASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gm6222-201ENSMUST00000120787 396 ntBASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gm12151-201ENSMUST00000121374 290 ntBASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gm4691-201ENSMUST00000182339 1000 ntBASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gm28630-201ENSMUST00000187806 498 ntBASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gm2451-201ENSMUST00000199447 999 ntBASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gm44344-201ENSMUST00000200287 129 ntBASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gm10290-201ENSMUST00000200451 999 ntBASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gm5626-201ENSMUST00000222151 1058 ntBASIC8.8□□□□□ -1
Mrpl55Q9CZ83 CT025535.1-201ENSMUST00000227172 491 ntBASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Mrpl55Q9CZ83 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms