Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Gm44651-201ENSMUST00000207343 372 ntBASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Gm18556-201ENSMUST00000219748 1031 ntBASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
Cldnd1Q9CQX5 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Gm22058-201ENSMUST00000083393 310 ntBASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cldnd1Q9CQX5 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cldnd1Q9CQX5 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Cldnd1Q9CQX5 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cldnd1Q9CQX5 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.46□□□□□ -0.26
Cldnd1Q9CQX5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cldnd1Q9CQX5 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.46□□□□□ -0.26
Cldnd1Q9CQX5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.46□□□□□ -0.26
Cldnd1Q9CQX5 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cldnd1Q9CQX5 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cldnd1Q9CQX5 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cldnd1Q9CQX5 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Cldnd1Q9CQX5 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cldnd1Q9CQX5 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Gm13611-201ENSMUST00000118269 318 ntBASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Gm14704-201ENSMUST00000120300 874 ntBASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Gm8712-201ENSMUST00000221090 701 ntBASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cldnd1Q9CQX5 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Gm25043-201ENSMUST00000158604 212 ntBASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Gm37835-201ENSMUST00000193305 361 ntBASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldnd1Q9CQX5 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms