Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Lsm7Q9CQQ8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm7Q9CQQ8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm7Q9CQQ8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm7Q9CQQ8 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Lsm7Q9CQQ8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Gm8805-201ENSMUST00000117848 313 ntBASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Gm26185-201ENSMUST00000157692 266 ntBASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Gm27572-201ENSMUST00000183702 255 ntBASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm7Q9CQQ8 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Mir686-201ENSMUST00000102174 109 ntBASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm7Q9CQQ8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms