Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cotl1Q9CQI6 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Gm45747-201ENSMUST00000212203 999 ntBASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 AC174742.1-201ENSMUST00000218272 304 ntBASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cotl1Q9CQI6 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Cotl1Q9CQI6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms