Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.18□□□□□ -0.3
Trim33Q99PP7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.18□□□□□ -0.3
Trim33Q99PP7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim33Q99PP7 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.17□□□□□ -0.3
Trim33Q99PP7 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Gm12091-201ENSMUST00000146791 830 ntBASIC13.17□□□□□ -0.3
Trim33Q99PP7 Gm23984-201ENSMUST00000157139 203 ntBASIC13.17□□□□□ -0.3
Trim33Q99PP7 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Gm8515-201ENSMUST00000194852 576 ntBASIC13.17□□□□□ -0.3
Trim33Q99PP7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.17□□□□□ -0.3
Trim33Q99PP7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Gm6180-201ENSMUST00000065243 498 ntBASIC13.17□□□□□ -0.3
Trim33Q99PP7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trim33Q99PP7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.16□□□□□ -0.3
Trim33Q99PP7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim33Q99PP7 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trim33Q99PP7 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim33Q99PP7 Gm15678-201ENSMUST00000117573 960 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms