Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Gm11618-201ENSMUST00000117946 267 ntBASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Gm24548-201ENSMUST00000158650 108 ntBASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Gm8584-201ENSMUST00000171982 758 ntBASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Gm37905-201ENSMUST00000195310 341 ntBASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Gm5781-201ENSMUST00000219792 443 ntBASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Ntng1-201ENSMUST00000051253 327 ntBASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Gm8325-201ENSMUST00000099086 453 ntBASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Col25a1Q99MQ5 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Gm28324-201ENSMUST00000187913 264 ntBASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Gm44405-201ENSMUST00000198952 126 ntBASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col25a1Q99MQ5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col25a1Q99MQ5 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms