Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Gm6447-201ENSMUST00000118905 835 ntBASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Tlr3Q99MB1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Tlr3Q99MB1 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Tlr3Q99MB1 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tlr3Q99MB1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tlr3Q99MB1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.21□□□□□ -0.14
Tlr3Q99MB1 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Tlr3Q99MB1 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Tlr3Q99MB1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Mir1982-201ENSMUST00000157368 74 ntBASIC14.2□□□□□ -0.14
Tlr3Q99MB1 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.2□□□□□ -0.14
Tlr3Q99MB1 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.2□□□□□ -0.14
Tlr3Q99MB1 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Itm2b-204ENSMUST00000228637 783 ntBASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Tlr3Q99MB1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Gm5687-201ENSMUST00000118252 640 ntBASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Gm2495-201ENSMUST00000191160 466 ntBASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tlr3Q99MB1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tlr3Q99MB1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms