Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk5rap3Q99LM2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Gm38144-201ENSMUST00000192790 465 ntBASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Cdk5rap3Q99LM2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.71□□□□□ -0.22
Cdk5rap3Q99LM2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Cdk5rap3Q99LM2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdk5rap3Q99LM2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.71□□□□□ -0.22
Cdk5rap3Q99LM2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.71□□□□□ -0.22
Cdk5rap3Q99LM2 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Cdk5rap3Q99LM2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.71□□□□□ -0.22
Cdk5rap3Q99LM2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cdk5rap3Q99LM2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdk5rap3Q99LM2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Gm21854-201ENSMUST00000179901 471 ntBASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Gm43094-201ENSMUST00000196549 921 ntBASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Cdk5rap3Q99LM2 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Cdk5rap3Q99LM2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap3Q99LM2 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap3Q99LM2 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap3Q99LM2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap3Q99LM2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap3Q99LM2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdk5rap3Q99LM2 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms